bhagesh-codebeast

slate

Beautiful static documentation for your API

polars

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

python-fire

Python Fire is a library for automatically generating command line interfaces (CLIs) from absolutely any Python object.

loguru

Python logging made (stupidly) simple

scientific-visualization-book

An open access book on scientific visualization using python and matplotlib

Bard-API

The unofficial python package that returns response of Google Bard through cookie value.

awesome-dataviz

:chart_with_upwards_trend: A curated list of awesome data visualization libraries and resources.

sketch

AI code-writing assistant that understands data content

solara

A Pure Python, React-style Framework for Scaling Your Jupyter and Web Apps

yarl

Yet another URL library

training-collection

Collection of bioinformatics training materials

segment-anything-video

MetaSeg: Packaged version of the Segment Anything repository

pySCENIC

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

elevatr

An R package for accessing elevation data

MelBioInf_docs

Melbourne Bioinformatics documentation in markdown format

chatGPT-for-genetics

Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.

async_shiny

Examples to implement asynchronous programming in Shiny ✨

TMKOC

List of TMKOC episodes

shinyCircos-V2.0

an R/Shiny application for interactive creation of Circos plot

MGCplotter

Microbial Genome Circular plotting tool for comparative genomics using Circos

tf-aws-env-nf

Terraform template to create AWS resources to execute jobs using nextflow

BioinformaticsIntroduction

Tutorials to get started in bioinformatics

accusyn

AccuSyn: An Accurate Web-based Genome Synteny Browser

ecc_finder

a tool to detect eccDNA using Illumina and ONT sequencing

couplet

rayshader_tutorial

Create high-quality 3D graphics with rayshader and rayrender.

CRISPRCATCH

Pipeline for reconstructing ecDNA based on data from PFGE

dolphinnext-studio

dolphinnext R markdown integration

BC2023

Bioinformatics Tutorial Exercises for BC2023 at JCU

dolphinnext

A graphical user interface for distributed data processing of high throughput genomics