bethsheets's repositories
palumbi_scripts
Most up-to-date scripts used in the Palumbi lab
SNPcalling_tutorial
A simple tutorial to map and call SNPs from RNAseq data
Population-Genomics-via-RNAseq
Guide to transcriptome assembly & analysis
Astroides_transcriptomics
Scripts used for Astroides calycularis transcriptome assembly and population genetic analysis
Dockstore-Dictionary
An unofficial dictionary for Dockstore.
dockstore-documentation
The documentation for Dockstore.org
dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore
genesis_wdl
WDL workflow for analysis based on the R GENESIS package
GTSeq_PLab_protocol
A guide for Genotyping-in-Thousands by Sequencing
qc-analysis-pipeline
Workflow used for WGS/WES data QC
tutorials
A place for BioData Catalyst tutorials
vcfToGds
Convert Vcf files to Gds format
verbose-fiesta
Scraps of documentation for various projects. The github suggested repo name was too relevant to my documentation style not to use it.
WDL-CI-actions
Example Repository for setting up GitHub Actions for WDL and CWL workflows for CI/CD