bernatgel

Bernat Gel's repositories

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

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An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests

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Examples on how to use the karyoploteR R/Bioconductor package

R package to create plots representing copy number data using karyoploteR

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Data plotting on gene structures

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A small javascript library to create genome/protein annotation images similar to those on Ensembl and UCSC.

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ASCAT copy number R package

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R package to remove false positives of CNV calling tools by using SNV calls

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Javascript client library for the Distributed Annotation System

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R package to check the relation between samples, if one derives from the other, if they come from the same individual...

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A small R package to find focal genomic gains and losses in SNP array data

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Data, code and images used to answer questions about karyoploteR by email, on biostars, on github...

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Modified version of R/Bioconductor PREDA package with SAM statistics re-enabled

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R package designed to simplify structural variant analysis

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