Benjamin Gallusser's repositories
gnn_agglomeration
Supervoxel Agglomeration using Graph Neural Networks with PyTorch geometric
gnn_toy_example
Getting familiar with Graph Neural Nets and the pytorch_geometric library
.vim
Personal VIM config
augmend
simple package for augmentation of n-dimensional arrays
bioimageutils
Reoccuring utility functions and scripts for ML on bioimages
motile
Multi-Object Tracker using Integer Linear Equations
project_summaries
Reports for selected projects I have worked on in the past
starthack19
IoT based app for automatic ride sharing, built at Start Hack 2019
bash-it
A community Bash framework.
benjamingallusser
My personal website
daisy
Block-wise task scheduling for large nD volumes.
funlib.segment
Tools to segment graphs and volumes
funlib.show.neuroglancer
Scripts and helpers for the neuroglancer WebGL viewer.
gunpowder
A library to facilitate machine learning on multi-dimensional images.
ilpy
Unified python wrappers for popular ILP solvers
laptrack
Particle tracking by solving linear assignment problem.
lsd
🌈
nerdcommenter
Vim plugin for intensely nerdy commenting powers
sacred
Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.
stardist
StarDist - Object Detection with Star-convex Shapes
traccuracy
Utilities for computing common accuracy metrics on cell tracking challenge solutions with ground truth