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Benoitdw

Benoitdw

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Benoitdw's starred repositories

csv_trimming

Package python to remove common ugliness from a csv-like file

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mutalyzer

Tool suite for HGVS variant descriptions

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docs.surrealdb.com

The documentation for SurrealDB, powered by Docusaurus

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granges

A Rust library and command line tool for working with genomic ranges and their data.

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hide-youtube-shorts

Browser add-on that hides YouTube-shorts videos

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pxblat

PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

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sambamba

Tools for working with SAM/BAM data

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PyVCF3

A Variant Call Format reader for Python.

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AFFiNE

There can be more than Notion and Miro. AFFiNE(pronounced [əā€˜fain]) is a next-gen knowledge base that brings planning, sorting and creating all together. Privacy first, open-source, customizable and ready to use.

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rnote

Sketch and take handwritten notes.

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AGFusion

Python package to annotate and visualize gene fusions.

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spacedrive

Spacedrive is an open source cross-platform file explorer, powered by a virtual distributed filesystem written in Rust.

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find_differential_primers

Code for design of diagnostic PCR primers, and metabarcoding markers.

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GeneWarrior

GeneWarrior is an online DNA and protein sequence manipulation tool

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awesome-dash

A curated list of awesome Dash (plotly) resources

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python-pre-commit

To start a Python project the right way!

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pyfaidx

Efficient pythonic random access to fasta subsequences

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gget

šŸ§¬ gget enables efficient querying of genomic reference databases

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perbase

Per-base per-nucleotide depth analysis

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flet

Flet enables developers to easily build realtime web, mobile and desktop apps in Python. No frontend experience required.

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python-bigquery

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gitignore

A collection of useful .gitignore templates

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easy-cli

Easy, yet powerful, command line configuration based on zsh, tmux and vim.

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cookiecutter

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

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rich

Rich is a Python library for rich text and beautiful formatting in the terminal.

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tabby

A terminal for a more modern age

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python-colorlog

A colored formatter for the python logging module

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msisensor-rna

MSIsensor-RNA: Microsatellite instability detection using RNA sequencing data

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