beasleyjonm's repositories
AOP-COP-Path-Extractor
Construct Adverse/Clinical Outcome Pathway queries and extract path information from ROBOKOP or other Biomedical Knowledge Graphs
information-resource-registry
The information resource registry is a listing of data sources present in the NCATS Data Translator system. Each information resource has an identifier, a short description, and an URL to more information about that resource.
biolink-model-epigenetix
Adding classes to describe epigenomic entities, such as histone modifications, nucleosomes, etc.
ORION
Code that parses datasets from various sources and converts them to load graph databases.
PubMed-Word-Cloud
Generates word cloud from terms mentioned in freely-available texts # extracted from PubMed queries for specific terms. Also normalizes # the names of extracted terms and colors them according to type (drug, # disease, method, etc.)