bcgsc / ntHash

Fast hash function for DNA/RNA sequences

http://bcgsc.github.io/ntHash/

bcgsc/ntHash Issues

`update-docs.sh` not found or executable
Updated 6 months ago
Exposing Functions in kmer.cpp
Updated 8 months ago
Example does not work
Closed a year ago3
NtHash object and ntf64(seq, k) produce different forward hash values when k is a multiple of 4
Closed a year ago1
Unstable hash values for k>64
Closed a year ago4
missing cloning instructions and dependencies
Closed a year ago1
Create a native Python interface for ntHash
Closed 2 years ago7
Inconsistent canonical hash values between forward and revcomp sequences of the same k-mer when k % 4 == 0 (not in v2.1.0 but) in v2.2.0
Closed 2 years ago3
Multispaced seeds
Closed 2 years ago6
It seems that the list of parameters of the NTF64 function in the sample code does not match the source code
Closed 2 years ago3
Unarchive the repository to let community easily contribute to ntHash
Closed 3 years ago4
Non-existing function used in README
Closed 5 years ago1
Make ntHash iterator bidirectional
Closed 5 years ago1
ntHash is not matching the article description?
Closed 6 years ago19
@param h number of hashes
Closed 7 years ago1
Calls to omp timing functions when _OPENMP is not defined
Closed 7 years ago3
Problem in rol. Undefined for s=64, probably does work when s>64.
Closed 7 years ago11