bcbio / bcbio.variation.recall

Parallel merging, squaring off and ensemble calling for genomic variants

bcbio/bcbio.variation.recall Issues

Biocontainer dependency issue
Updated 10 months ago1
bcbio-variation-recall ensemble error: java.io.IOException: Transport endpoint is not connected
Updated 4 years ago
Ensemble "Problem retrieving reference variant"
Updated 4 years ago7
Reg: Joint calling with Freebayes
Closed 4 years ago2
bcbio-variation-recall and java version
Closed 5 years ago5
Ensembl varscan and somaticsniper
Updated 6 years ago4
ensembl javaindexoutofbounds Exception
Closed 6 years ago1
Ensembl error on DP4
Closed 6 years ago3
ensemble error latest
Closed 7 years ago2
ensemble error
Updated 7 years ago12
Merge problem
Updated 7 years ago4
Quality and Filter Flags in bcbio-variation-recall square
Closed 7 years ago2
ensemble caller
Updated 7 years ago7
no ref calls after squaring
Updated 8 years ago2
What steps does bcbio-variation-recall merge actually do?
Closed 8 years ago2
merge vcf
Closed 8 years ago12
merge vcf
Closed 8 years ago2
bcbio.variation.recall ensemble fails to find reference dictionary
Closed 8 years ago1
Using recall for somatic samples
Updated 8 years ago7
different snv numbers for different aproaches
Updated 9 years ago2
How should vcfs/bams be specified in a text file/command line
Closed 9 years ago2
error of non-sorted file during merge subcmd
Closed 9 years ago1
"Warning(freebayes): Could not set the region of the variants input file to ..."
Closed 9 years ago1
Error during make using lein
Closed 10 years ago1