Blaise deB Frederick's repositories
picachooser
A fast lightweight gui tool for sorting components from a MELODIC probabilistic ICA analysis
stabilitycalc
Automatic QC processing for fMRI data
basecontainer
Unix base container with mamba installed
basecontainer_plus
basecontainer with FSL tools tacked on
bbfrederick
Personal repository
breathingstim
Paced breathing psychopy stimulus
checkerflash
Psychopy code to generate flashing checkerboard stimuli
cvrprocessing
Code for processing data for grant NS097512
docker-opengl
Docker - Mesa 3D OpenGL Software Rendering (Gallium) - LLVMpipe, and OpenSWR Drivers
fix-container
Containerized version of FSL FIX
fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
gen_mid_regressors
Generate FSL regressors from the output of an EPrime MID run file
gradunwarp-container
Containerized version of the HCP gradunwarp script
micscriptlib
Routines to simplify the creation of neuroimaging proc scripts
niworkflows
Common workflows for MRI (anatomical, functional, diffusion, etc)
phys2denoise
A collection of scripts to prepare physiology data for fMRI denoise
physiopy.github.io
Main website for Physiopy documentation.
physioqc
Toolbox for physiological data (Automagic) Quality Control
stable-diffusion-webui-mps
Stable Diffusion web UI
ukbb_processing
Scripts to redo various parts of the UKBB preprocessing chain