Charlie Bayne's repositories
geopalette
An R package for making color palettes from user specified geographical locations via satellite imagery.
nanopore_pipelines
Nanopore sequencing experimental protocols and computational pipelines
baynec2.github.io
My personal website
biolabr
The goal of biolabr is to provide a consistent location to store and access an eclectic group of R functions I have found to be useful.
EcB_multiomics
Repo containing all of the analysis associated with Multi-omic Signatures of Host Response Associated with Presence, Type, and Outcome of Enterococcal Bacteremia
HEKQC
Automated Pipeline for QC of HEK Standards. Uses Fragpipe to process results, SQLite to store relevant metrics, and RShiny to display metrics in app
mg_to_mpdb_walkthrough
metagenomic sequences via qiita to metaproteomic database creation walkthrough
trpv1_scrnaseq
Tool to look for genes coexpressing with trpv1 in a DRG single cell rnaseq dataset
mspms
R package for the analysis of Multiplex Substrate Profiling by Mass Spectrometry for Proteases (MSP-MS) Data
mspms-shiny
Shiny interface to the mspms R package