Balázs Fábián (balazsfabian)

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Balázs Fábián's repositories

curved-diffusion

Tools to calculate MSD on meshed surfaces from molecular dynamics

MD_anisotropy

Anisotropic diffusion tensor in Molecular Dynamics

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git-workflow

Basic Git Concepts and Workflow

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conan

Analysis of contacts in molecular dynamics trajectories

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DiffusionGLS

Estimate the self-diffusion coefficient of a trajectory with a Generalized Least Squares (GLS) optimization procedure.

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gitim

Generalized Identification of Truly Interfacial Molecules

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GMRES

A c++ implementation of the GMRES method for approximating the solution to a linear system.

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gromacs

Public/backup repository of the gromacs molecular simulation toolkit

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maestrowf

A tool to easily orchestrate general computational workflows both locally and on supercomputers

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vermouth-martinize

Describe and apply transformation on molecular structures and topologies

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VTP_source_code

An implementation of our paper: Fast and Exact Discrete Geodesic Computation Based on Triangle-Oriented Wavefront Propagation

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