balabanmetin / apples

distance based phylogenetic placement

balabanmetin/apples Issues

issues with jplace output
Updated a year ago9
Apples collapses some branches of the backbone tree to polytomies in the jplace file
Updated a year ago1
Just obtain a distance matrix
Closed 2 years ago4
RNA data
Updated 2 years ago
Fixed backbone branch labels
Updated 2 years ago
Any binary executables?
Updated 3 years ago1
Apples operands could not be broadcast together with shapes
Closed 3 years ago2
ValueError: operands could not be broadcast together with shapes
Closed 4 years ago2
NameError: name 'treecore' is not defined
Closed 4 years ago2
Improve installation
Closed 5 years ago
Make available on pip
Closed 5 years ago
Improve documentation
Updated 5 years ago
Test and coverage
Updated 5 years ago
Call to fastme via subprocess.call should be passed as sequence instead of string
Closed 6 years ago1