babinyurii / exome-mapping-and-variant-call

dealing with exome data from bgi machine

exome-mapping-and-variant-call

Notes on NGS data analysis: mapping human exome data.

tools used:

• FastQC. (on github)
• Trimmomatic
• bwa. (on github)
• samtools. (samtools on github and bcftools on github)
• python and pyvcf