avilella

life-in-the-uk-test

phageterm

Phageterm fork of the code that is available via sourceforge

utils

utils

alphafold_non_docker

AlphaFold2 non-docker setup

ancestry_tools

ancestry tools

awesome-molecular-generation

Awesome papers related to generative molecular modeling and design.

benchling-api

A python wrapper for the benchling api

bioSyntax

Syntax highlighting for computational biology

ColabDesign

Making Protein Design accessible to all via Google Colab!

dandelion

dandelion - A single cell BCR-seq analysis package for 10X Chromium 5' data

dotfiles

dotfiles

DProQ

Deep learning prediction of protein complex structure quality

enclone

VDJ Clone Analysis Tools

folding_tools

A collection of *fold* tools

GraphBP

Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]

hello

Classic hello world script in Nextflow language

InSilicoSeq

:rocket: A sequencing simulator

methylKit

R package for DNA methylation analysis

modPhred

modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

nf-bowtie

Align reads with bowtie to reference.

paladin

Protein Alignment and Detection Interface

papers_for_protein_design_using_DL

List of papers about Proteins Design using Deep Learning

pline

JSON-based web interfaces for command-line programs

presto

fork of pRESTO: A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.

sword

tool for finding similar word in a file

tosheets

Send your stdin to google sheets

Uni-Fold

An open-source platform for developing protein models beyond AlphaFold.

wgbs_tools

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

word_cloud

A little word cloud generator in Python