Auwerx Lab | Laboratory of Integrative Systems Physiology (LISP) at EPFL's repositories
renku-project-template
A repository for default Renku project templates.
renku-r-tools
A toolbox to work with R projects on Renku
Yildiz_eLife_2023
Scripts and data used in the paper "Hepatic lipid overload triggers biliary epithelial cell activation via E2Fs"
bxd-fasted-gene-expression-bat-microarray-r1858
Generate expression matrix from microarray data derived from BXD brown adipose tissue
bxd-fasted-gene-expression-liver-microarray-r5728
Generate expression matrix from microarray data derived from BXD liver
bxd-fasted-gene-expression-quadriceps-microarray-r1833
Generate expression matrix from microarray data derived from BXD quadriceps
bxd-fasted-gene-expression-scwat-microarray-r5652
Generate expression matrix from microarray data derived from BXD subcutaneous adipose tissue
bxd-microarray-probe-mask
Create microarray probes kill lists for polymorphic targets in the BXD mouse population
dada2_pipeline
A template analysis for the dada2 pipeline
dox-9tb-mouse-metagenomic-analysis-01
Impact of two tetracycline compounds on fecal microbial communities of mice before and after infection with Influenza A virus
renku-r-template
This is a bare R project template that can be directly imported in Renku.
renku-tools
A toolbox to work on renku
renkulab-docker
Jupyter images used by the Renku platform
slims-lisp-python-api
A high-level CLI for Slims REST API
elife_gut_paper
Scripts and data used in the paper Genetic and dietary modulators of the inflammatory response in the gastro-intestinal tract of the BXD mouse genetic reference population
survival_analysis
A R project for survival analysis based on the R "survival" package.