abhithakur's repositories
MedSAM
Segment Anything in Medical Images
build-your-own-x
Master programming by recreating your favorite technologies from scratch.
urban-fiesta
USA ELECTRIC ENERGY PROJECTIONS & ANALYSIS
Edgar_parsing
just the content for a series on the EDGAR API
sec-edgar
Download all companies periodic reports, filings and forms from EDGAR database.
edgar-crawler
The only open-source toolkit that can download EDGAR financial reports and extract textual data from specific item sections into nice and clean JSON files.
MONAILabel
MONAI Label is an intelligent open source image labeling and learning tool.
MONAI-tutorials
MONAI Tutorials
roboflow_notebooks
Examples and tutorials on using SOTA computer vision models and techniques. Learn everything from old-school ResNet, through YOLO and object-detection transformers like DETR, to the latest models like Grounding DINO and SAM.
wsidicom
Python package for reading DICOM WSI file sets.
HistoSSLscaling
Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023).
wsidicomizer
Python library for converting WSI files to DICOM
python_for_microscopists
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
vision
Datasets, Transforms and Models specific to Computer Vision
lightning-sam
Fine-tune Segment-Anything Model with Lightning Fabric.
ocelot23algo
OCELOT 2023: Cell Detection from Cell-Tissue Interaction
DS-Career-Resources
Compilation of resources for aspiring data scientists
neilson_book_code
Code samples for my book "Neural Networks and Deep Learning"
video2x
A lossless video/GIF/image upscaler achieved with waifu2x, Anime4K, SRMD and RealSR. Started in Hack the Valley 2, 2018.
pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
fastbook
The fastai book, published as Jupyter Notebooks
pcam
The PatchCamelyon (PCam) deep learning classification benchmark.
QuickPathAnnotator
An open-source digital pathology based rapid image annotation tool
stormdown-html
A PhD dissertation template for Harrisburg University in R Markdown
DenseNet
Densely Connected Convolutional Networks, In CVPR 2017 (Best Paper Award).
MONAIBootcamp2021
Materials for the 2021 MONAI Bootcamp
OpenCAL
Opensource CAL 3D printer with configuration flexibility based on commercially available optical components and 3D printed components. Intended for research purposes.
basic_unet_example
An example project of how to use a U-Net for segmentation on medical images with PyTorch.
Athena
Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM