asshah4 / genetics

workspace for computational genetics

genetics

Sandbox for evaluation of genetic files. No guarantees on quality/bugs unless wrapped released as package later on.

Abbreviations

Acronym	Expanded
vcf	variant call format

Tools

samtools, bcftools, htslib

https://www.htslib.org

These are general C-based NGS data analysis tools.

vcftools

https://vcftools.github.io/index.html