Nnamdi Joseph Asouzu's repositories
Bioinformatics-thesis-project
This research project is based on comparative genomics and phylogenetics analysis. These codes were used to analyze genomic data and show evidence of co-evolution between Lactobacillus bacteria and bacteriophages.
Support-Vector-Machines
The Least Squares SVM (LSSVM) MATLAB toolkit was used in this project.
Bioinformatics-training-collection
A collection of resources for learning about tools and programming languages related to Bioinformatics
Biostatistics
Projects on statistical concepts such as model fitting and selection, mixed / hierarchical models, longitudinal models and models for missing data.
Dashboard--using-Dash-plotly
This script uses Dash/Plotly library to produce an interactive dashboard for simultaneous analysis for multiple datasets.
deep_trader
This project uses reinforcement learning on stock market and agent tries to learn trading. The goal is to check if the agent can learn to read tape. The project is dedicated to hero in life great Jesse Livermore.
diagnostics_exome_reporting
Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.
javaProject
A java project to design a road navigation system with different conditions on various types of roads. Features of object-oriented programming such as polymorphism, dynamic binding and inheritance were used in this project. Equally, defensive, total and nominal programming techniques were extensively used in this project
Statistical_learning-with-R
Projects on statistical learning concepts such as linear regression, classification techniques(logistic regression, LDA and KNN), resampling methods, linear model selection, lasso and ridge regression, GAM, decision trees, SVM, PCA and clustering techniques
TimeSeries
This script combines multiple datasets into a dictionary of data frames and produces time series subplots of any set of chosen variables whilst making use of pandas resampling and rolling functions.
Docker
Hosting of Rshiny app on docker
GATK-pipeline
A shell script which implements GATK pipeline for variant calling.
github-readme-stats
:zap: Dynamically generated stats for your github readmes
Machine-learning-with-Python
Projects using optimal machine learning algorithms to solve problems
metagenomics_summer_school
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
Multivariate-Statistical-Analysis
This is a project on multivariate analysis of soil samples in Brazil
PriorR
PriorR
proclasp
Classification of prokaryotic genomes on the species level
Projects
:page_with_curl: A list of practical projects that anyone can solve in any programming language.
shinyauthr
R package with shiny authentication modules
Univariate-statistical-data-analysis
Projects on the following concepts: correlation analysis, hypothesis testing, linear regression, model diagnostics and variable selection, logistic regression and ANOVA
variant_calling_pipeline
Comprehensive SNP/indel/structural variant calling pipeline for model organisms
WES_ShinyDiscover
A Shiny interface to filter and identify variants of interest from whole exome data
Workshop-Bash_Scripting_And_HPC_Job_Scheduler
A workshop to get you started with automating your data analysis work in a High Performance Computing environment
wumpus_world_agents
The Wumpus World Agents (Naive, Probabilistic, Deep Q-learning)
WumpusWorld
Stuart Russel and Peter Norvig's Wumpus World environment...