asifr

PHP-PubMed-API-Wrapper

A standalone PHP class provides a wrapper around the PubMed API. Fully documented with working examples.

Organize-PDFs

A python script that copies PDF files from a source directory into a destination directory and extracts pages as PNG images and fulltext.

Machine-generated-journal-article-titles

A random title generator using NLP in Python. Demo: http://asifr.com/faker/

pmquery

Query PubMed and download results to text files

Bookmarked

Bookmarked is a barebones bookmarking application supporting multiple users. Uses a bookmarklet to save sites.

Research-analytics

Data mining and analysis of research productivity using NLP in Python, Demo: http://soterixmedical.com/publications/

MEP-fit

Nonlinear convex optimization in JavaScript for fitting MEP data

pocco

A Python port of Docco

composr

Static report generator (HTML & PDF) composed of Python objects

flask-boilerplate

Flask app boilerplate

notebooks

Notebooks and scripts

press

Static site generator in Go

2018spring

armisc

Contains many functions useful for data analysis, high-level graphics, utility operations.

cdk

CDK is a tool to quickly generate single-file html slide presentations from AsciiDoc

d3visualization

An alternative gallery for d3.js

explore

Community-curated topic pages on GitHub

jsxtransform

Transforms JSX files to HTML

ka-challengeframework

mdoc-php

MATLAB m-file to HTML documentation generator

numerical-linear-algebra

This course contains the notebooks for the Numerical Linear Algebra elective in USF's MSAN program, summer 2017

octopress

Octopress is an obsessively designed framework for Jekyll blogging. It’s easy to configure and easy to deploy. Sweet huh?

raw

The missing link between spreadsheets and vector graphics

Scholared-app

A Mac OS X desktop application to query PubMed, written in C#