asif7adil

scSPARKL

scSPARKL is an Apache spark based pipeline for performing variety of preprocessing and downstream analysis of scRNA-seq data.

awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

awesome-python

A curated list of awesome Python frameworks, libraries and software

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

ML-From-Scratch

Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from data mining to deep learning.

MLZheimers

Machine Learning based Alzheimer's Disease prediciton

rapids-single-cell-examples

Examples of single-cell genomic analysis accelerated with RAPIDS

SCORPIUS

Linear trajectory inference for single-cell RNA-seq

scrna_scripts

scripts and notebooks from sanbomics

scrnaseq

Workflow for single-cell RNA-seq analysis using Seurat

single-cell-experiments

Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark

splatter

Simple simulation of single-cell RNA sequencing data

StartupDataScience