ashishjain1988

MAFDash

MAFDash: R Package to Easily Create an HTML Dashboard to Summarize and Visualize Data from Mutation Annotation Format (MAF) File

MyPART-Analysis

Scripts to process and analyze the MyPART NGS data (RNASeq, WES, and WGS)

academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

KnowYourTarget

Create an HTML Dashboard to know more about effects and drugs targeting a gene using NCI60 and DepMap data

ashishjain1988

Github Profile

ashishjain1988.github.io

Website

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

cellcharardigen

gatk

Official code repository for GATK versions 4 and up

gatk4-rnaseq-germline-snps-indels

Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools

genewalk

GeneWalk identifies relevant gene functions for a biological context using network representation learning

GFPGAN

GFPGAN aims at developing Practical Algorithms for Real-world Face Restoration.

Immuno_notes

Immunology-related bioinformatics data and tools

interacCircos

An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot

it-cert-automation-practice

Google IT Automation with Python Professional Certificate - Practice files

lazypredict

Lazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning

mofapy2

Multi-omics factor analysis v2

neat-genreads

NEAT read simulation tools

open-data-registry

A registry of publicly available datasets on AWS

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

scJoint

scvi-tools

Deep probabilistic analysis of single-cell omics data

shinyDepMap

A shiny-based web tool for interactive analysis of DepMap data

snakemake-workflow-template

A template for standard compliant snakemake-workflows

stock-prediction-deep-neural-learning

Predicting stock prices using a TensorFlow LSTM (long short-term memory) neural network for times series forecasting

test_repo

TSO500DataAnalysisPlots

use-shopping-cart

Shopping cart state and logic for Stripe

VCFAnnotator

Automatic annotation generation of the Variants in the VCF file into a text file