ASHISH JAISWAL's repositories
alphafold-analyser
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
alphafold-pdb_mmcif_download-on-hpc
alphafold pdb_mmcif_download on hpc without error
AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
coderigor
Code Rigor and Reproducibility with R
esm-fold
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
fairseq
Facebook AI Research Sequence-to-Sequence Toolkit written in Python.
fasta-sequence-extractor
Script to extract a specified number of FASTA sequences from a multi-FASTA file.
landingpage
website landing page coding bootcamp 17 June 2020
MetaVelvet
An extension of Velvet assembler to de novo metagenome assembly from short sequence reads
one-liners
Useful bash one-liners for bioinformatics.
openfold-copy2024
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
pdb2pqr
PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.
portfolio-2020
Ashish portfolio coding bootcamp
script-toChek-GTP-Sample-output-After-Prompts-and-output-PERCENTAGE
The script reads an input file and counts the occurrences of each keyword in a case-insensitive manner. It then calculates the percentage of each keyword and saves the results to an output file. Additionally, it generates a pie chart showing the percentage distribution of the keywords.
virtuartlity2
virtuartlity2 final project
VirtuARTlity_frontend-2
Frontend code for Virtuartlity