ashander

rmarkdown-polyglot

demo of rmarkdown's versatility for academic publishing

ashander.github.io

My website revamped

ftprime

Forward-time simulation of the msprime data structure (for development)

.files

local config files

2017-06-08-QuARRC-UMN

AISproj

Predictive boater movements and simulation of lake-level risk of infestation in MN

bio_610B

Course materials for Advanced Biological Statistics II, Bio 610B, at the University of Oregon.

bookdown-minimal

An absolutely minimal bookdown example

breadblog

caret_talk

caret and recipes talk for Practical Data Science Utah Meetup

cdc-vax

DC vaccine allocation data from cdc

cyipopt

Cython interface for the interior point optimzer IPOPT

forecast-standards

Exploring possible metadata and data formatting standards for comparing Ecological Forecasts

fwdpy11_arg_example

Example of tracking the ARG during forward simulations. Implementation is a Python package using fwdpp, fwdpy11, msprime, and pybind11.

github-quickstart

How to get started on Github (as a scientist)

interpolation_methods

landscape_msprime

landsim

efficient, forwards-time simulation of populations on raster-based landscapes

msprime

A reimplementation of Hudson's classical ms simulator for modern data sets.

multiproc-click

opty

A library for using direct collocation in the optimization of dynamic systems.

pip-r-demo

using pip to install an R-based command line util

PPR

MDP R implementation of the PPR problem

pyslim

Tools for dealing with tree sequences coming to and from SLiM.

r-markdown-tutorial

A short tutorial on using R + markdown

rastervis

The raster package defines classes and methods for spatial raster data access and manipulation. The rasterVis package complements raster providing a set of methods for enhanced visualization and interaction.

sesync

talapas

tortoisescape

workshop-cloud-native

Workshop tutorial on cloud-native access to EFI forecasts