arw36

Anna Willoughby's starred repositories

HumanDiseaseOntology

Repository for the Human Disease Ontology.

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awp_socialatlas

Shiny code for the Athens Social Atlas application, part of the Athens Wellbeing Project.

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Animl comprises a variety of machine learning tools for analyzing ecological data. The package includes a set of functions to classify subjects within camera trap field data and can handle both images and videos.

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tricolore

A flexible color scale for ternary compositions

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hmw

(experimental) Machine readable version of Handbook of the Mammals of the World

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caesar

Backend automation and orchestration

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tigervid

Scans video looking for frames which include animals, extracts video clips and a final report

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neotropical_frugivores

Code and data for Frugivoria: Neotropical frugivore functional trait database

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RShinyFuTRES

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OneLife

a multiplayer survival game of parenting and civilization building

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gpdd

:package: for the Global Population Dynamics Database

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progress-bar

📊 Flask API for SVG progress badges

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PNAS2021

900

aphis-inspection-reports

Inspection data and PDFs from the USDA's Animal and Plant Health Inspection Service.

1200

rbcL-dual-index-metabarcoding

This repository includes modified scripts to use an existing bioinformatics pipeline for DNA metabarcoding to identify mixed plant species using rbcL

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CameraTrappingAnalysis

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Flea-Collection

100

aviandietdb

Avian Diet Database Summary Functions

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statrethinking_winter2019

Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019

201600

statistics-for-ecologists-Master-courses

The material for a course on Statistics for ecologists I teach every year to Master students.

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promed-api

Unofficial Python API of ProMed.

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Inat_Images

Script to download images from inaturalist.org

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ipm_for_parasites

Code for IPM host-parasite analysis

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boids

The age old boids project!

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scimeetr

Scimeetr is an R package, and a shiny app that helps researchers introduce themselves into their scholarly literature. It contains a suit of function that let someone: load bibliometric data into R, make a map of peer reviewed papers by creating various networks, find research community, characterize the research communities, and generate reading list.

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