Arup Ghosh's repositories
MyCutOff
MyCutOff is a web app for scraping product prices from leading Indian e-commerce websites and sending price drop alerts when the user-defined limit is reached. This application also has a public interface where all the scrapped products are listed with the most recent prices. This is a very old project developed using PHP and MySQL and will not work with the modern version of websites.
PubmedScripts
Python functions to curate data from NCBI and EUROPMC API.
arupdev
Personal website usign Jekyll theme, migration from hugo.
BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
biopython
Official git repository for Biopython (originally converted from CVS)
funkyheatmap
Visualising data frames as funky heatmaps đź“Š
genTB_downloader
Download analysis results from https://gentb.hms.harvard.edu/
hdWGCNA
High dimensional weighted gene co-expression network analysis
heredity.github.io
Temporary website for heredity.bio
hts-specs
Specifications of SAM/BAM and related high-throughput sequencing file formats
intel-models
Model Zoo for Intel® Architecture: contains Intel optimizations for running deep learning workloads on Intel® Xeon® Scalable processors
journal-metrics
A searchable interface for journal impact factor and other metrics
MultiPlanarUNet
Multi-Planar UNet for autonomous segmentation of 3D medical images
ncovstatus.live
A COVID-19 Dashboard created using Google Sheet and PHP
nf-core-viralrecon
See the main fork of this repository here >>>
scrnadatasets
Collection scRNA datasets from NCBI GEO
single_cell_datasets
A searchable interface for Single cell datasets using Streamlit framework.
singularity-conda
A Singularity recipe that properly initialize a conda environment
swot
Identify email addresses or domains names that belong to colleges or universities. Help automate the process of approving or rejecting academic discounts.
UPXome-Demux
Demultiplex QIAseq UPXome FASTQ files.