Shriram Bhat's repositories
ChengLab_templates
Bioinformatics shell scripts for reference (Polar and Polar2020)
artorias111.github.io
The blog
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fasta_tools
Scripts to work with fasta files
fasTools
Tools to work with fasta files. There's many, many better implementations, this is just my shot at it.
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genomes-nf
scripts and tools for managing genomes
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pyannotate
A snakemake pipeline to annotate genomes
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RepeatMasker
RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.
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scripts
Scripts for telomere length project
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yahs
Yet another Hi-C scaffolding tool
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