arsheed's repositories

seurat

R toolkit for single cell genomics

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2012-11-scripps

Software Carpentry repository for Scripps, Nov 15-16 2012

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AdvancedHeatmapTutorial

for YouTube Channel

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mirna

microRNA profiling pipeline

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ngs

PennSCAP-T Pipeline

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ngseasy

Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)

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Ribbon

A genome browser that shows long reads and complex variants better

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single_cell_analysis

Documents used for workshops on single cell analysis

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TissueMAPS

Main TissueMAPS repository that bundles different repositories.

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unified_gene_expression

Meta-analyze and collate genome-wide gene expression from eye tissues

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web-TCGA

A light weight shiny based web app to access TCGA data

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