arnaudon

simplicial-kuramoto

Tool to numerically solve and analyse simplicial Kuramoto models.

netSALT

Simulation of lasing networks with quantum graphs and SALT theory.

arnaudon.github.io

BluePyOpt

Blue Brain Python Optimisation Library

datareuse

Tool to reuse saved computations with various format

nrn

NEURON Simulator

RMST

xgi

CompleX Group Interactions (XGI) provides an ecosystem for the analysis and representation of complex systems with group interactions.

arnaudon.github.io_old

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

BluePyMM

Blue Brain Python Cell Model Management

DynGDim

Dynamic Graph Dimensionality is a methodology for computing the relative, local and global dimension of complex networks.

GDR

Graph Diffusion Reclassification

hcga

Highly Comparative Graph Analysis

jidt

JIDT: Java Information Dynamics Toolkit for studying information-theoretic measures of computation in complex systems

dask-mpi

Deploy Dask using MPI4Py

morph-tool

morphapi

Apis to download neuronal morphologies from publicly available datasets

MorphIO

A python and C++ library for reading and writing neuronal morphologies

MultiscaleCentrality

Graph centrality is a question of scale

NeuroM

Neuronal Morphology Analysis Tool

neuronaldynamics-exercises

Python exercises accompanying the book "Neuronal Dynamics"

NeuroR

A collection of tools to repair morphologies

plotly-helper

PyGenStability

Python wrapper of the generalised Louvain, including Markov Stability

pyunicorn

Unified Complex Network and Recurrence Analysis Toolbox

TMD