Arnaud Bore's repositories
AndysBrainBook
This repository contains the files that generate Andy's Brain Book on ReadTheDocs.
aodf-toolkit
Python toolkit for estimating asymmetric ODFs by filtering a symmetric ODF image
containers-scilus
Files needed to build a container to run all scilus flows (except dmriqc_flow)
dmriqc_flow
A Nextflow pipeline for diffusion MRI quality check
lab-documentation
SIMEXP-Documentation
mercure-dcm2bids
Module to run dcm2bids conversion in mercure.
microbrain
Fully automated whole-brain diffusion MRI analysis of grey matter
nf-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
registration_flow
Nextflow pipeline to register Nifti and Trk in a common space
tractoflow
TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
tractoflow_documentation
Documentation related files for tractoflow
trimeshpy
Triangular Mesh Processing in Python