arivers

cnaps

Code for: "Fast and Flexible Multi-Task Classification Using Conditional Neural Adaptive Processes" and "TaskNorm: Rethinking Batch Normalization for Meta-Learning"

ALDEx_bioc

ALDEx_bioc is the working directory for updating bioconductor

selbal

selbal: selection of balances for microbial signatures

coda.base

A Basic Set of Functions for Compositional Data Analysis

coda.count

mixpack

mixpack: a package for mixture components analysis

documentation-theme-jekyll

A Jekyll-based theme designed for documentation and help systems. See the link for detailed instructions on setting up and configuring everything.

disentangled_vae

Replicating "Understanding disentangling in β-VAE"

uswds-jekyll

A Jekyll theme showcasing the U.S. Web Design System

DEICODE

Robust Aitchison PCA from sparse count data

tf_metrics

Multi-class metrics for Tensorflow

digital-display-character-rec

nodejs-poolController

An application to control pool equipment from various manufacturers.

pyEQL

A Python library for solution chemistry

MCclassifier

vica

Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes

nmslib

Non-Metric Space Library (NMSLIB): An efficient similarity search library and a toolkit for evaluation of k-NN methods for generic non-metric spaces.

preseqR

An R package for estimating library complexity

babynames

Fun with the Social Security Administration's baby name data

kClust

kClust is a fast and sensitive clustering method for the clustering of protein sequences. It is able to cluster large protein databases down to 20-30% sequence identity. kClust generates a clustering where each cluster is represented by its longest sequence (representative sequence).

SpiecEasi

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

PythonCyc

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

Platypus-Conquistador

Confirming specific taxonomic groups within your samples.

spyre

a web application framework for python

RAPSearch2

Reduced Alphabet based Protein similarity Search

SEAStAR

SEAStAR is a package of tools supporting the construction of complete analysis pipelines for next-generation (Illumina®, SOLiD™) sequencing data generated from environmental samples.

oce

R package for oceanographic processing