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Marius Arend (arendma)

arendma

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Marius Arend's repositories

Crekapp

Proteomics and constraint-based modelling reveal enzyme kinetic properties of C. reinhardtii on a genome-scale

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GRN_web

This repository contains the source code for the R Shiny server application allowing to query the gene regulatory network presented in https://www.nature.com/articles/s41467-023-38183-4

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GRN_code

This repository contains the code for the creation of gene regulatory networks presented in the publication "Widening the landscape of transcriptional regulation of green algal photoprotection"

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autopacmen

Retrieves kcat data and adds protein allocation constraints to stoichiometric metabolic models according to the sMOMENT method

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COMMIT

COMMIT: Community-dependent gap-filling considering metabolite leakage

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NIDLE-flux-code

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