ARAMIS Lab

clinica

Software platform for clinical neuroimaging studies

clinicadl

Framework for the reproducible processing of neuroimaging data with deep learning methods

AD-DL

Classification of Alzheimer's disease status with convolutional neural networks.

AD-ML

Framework for the reproducible classification of Alzheimer's disease using machine learning

DL4MI

Workshop Deep Learning for Medical Imaging

Notebooks-AD-DL

Notebooks for classification of Alzheimer's disease using deep learning

clinica-pydra-freesurfer

Pydra tasks for FreeSurfer designed for Clinica

MICCAI-educational-challenge-2020

AD Classification using Clinica

axial-mlp

Implementation of Axial-MLP in PyTorch

clinica-pydra-fsl

Pydra tasks for FSL designed for Clinica

miccai2022-stratifiad

pydra-bids

Pydra tasks for BIDS I/O

hiplay7-thickness

NOW-2023

Repository for the 2023 NeuroScience Open Workshop

pydra-dcm2bids

Pydra tasks for dcm2bids

clinica-pydra-ants

Pydra tasks for ANTs designed for Clinica

clinica-pydra-petpvc

Pydra tasks for PETPVC designed for Clinica

clinicadl-pythae

clinicadl_bis

Framework for the reproducible processing of neuroimaging data with deep learning methods

clinicadl_handbook

Tutorial to use (new version of) clinicadl (>1.0.3)

dataset-registry

Public dataset registry for dvc

handbook

The Aramis Lab Handbook

histo_mri

Code for assessing the possibility to detect neurofibrilary tangles in MR images of mouse brains using histological cuts and deep learning

idhm2022-bids-primer

idhm2022-pydra-demo

NOW-2023-lib

Library to be used for NOW 2023 workshop

pydra-brainstat

Pydra tasks for BrainStat

pydra-spm

Pydra tasks for SPM

pydra-tasks-ants

Pydra tasks for ANTs

RSECon23-Pydra