Abdurrahman OLĞAÇ's repositories
DiffDock-1
Colab version of "DiffDock: : Diffusion Steps, Twists, and Turns for Molecular Docking"
Codes-for-Medium-Articles
Codes for Medium Articles
datasharing
The Leek group guide to data sharing
DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
DiffLinker
DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design
DiffSBDD
A Euclidean diffusion model for structure-based drug design.
django-guardian
Implementation of per object permissions for Django 1.2+
DrugGEN
Official implementation of DrugGEN
EquiBind
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
equidock_public
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
fileoperations
The aim of this repo is to help researchers dealing with file operations by using python in molecular modeling field.
molgears
molgears
pymol
Pymol Toolkit
Jupyter_Dock
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
mol2vec
Mol2vec - an unsupervised machine learning approach to learn vector representations of molecular substructures
OnionNet-2
OnionNet-2 is constructed based on convolutional neural network (CNN) to predict the protein-ligand binding affinity.
STAMP-DPI
Deep Learning for Drug Protein Interaction (DPI) Prediction