anthonyghr / seirlib

Implement the SEIR epidemic model in Clojure

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Description
===========

This library is an incubator for testing epidemic models, specifically compartment models (see http://wiki.eclipse.org/Introduction_to_Compartment_Models)
The library is implemented in Clojure, but provides an API for Java code to use.

Usage
=====

The easiest way to use this library from Java is to generate a JAR file that can be included into your application.
1) Download Leiningen (https://github.com/technomancy/leiningen), placing the lein script in the path for easier use.
2) In the directory where you placed the downloaded seirlib code, type: lein uberjar
3) That's it! Place the generated jar (seirlib-1.0.0-SNAPSHOT-standalone.jar) in your application path and your are good to go.

The testseirlib subdirectory contains a simple Java class demonstrating how the library can be used.


Copyright (C) 2011 RODS Lab, Department of BioInformatics, University of Pittsburgh

Distributed under the Eclipse Public License, the same as Clojure.

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Implement the SEIR epidemic model in Clojure


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Language:Clojure 82.9%Language:Java 17.1%