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answer_looker (answer19831020)

answer19831020

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RectChr

Multi-level visualization of genomic statistical variables on rectangular chromosomes

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LDBlockShow

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

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VCF2Dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

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Reseqtools

A Toolkit for analyzing next-generation DNA Re-Sequencing data

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PopLDdecay

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

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BamDeal

BamDeal: a comprehensive toolkit for bam manipulation

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pasapipeline.github.io

Documentation for the PASA Pipeline

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PASA software

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ConPADE

Contig Ploidy and Allele Dosage Estimation

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BlastGraph

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beagle-lib

(Unofficial fork of) A general purpose library for evaluating the likelihood of sequence evolution on trees

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