Anshupa's repositories
ALPS
AnaLysis routines for ePigenomicS data.
Language:RNOASSERTION000
Analysis_pipelines
Workflows and scripts for RRBS, RNA-Seq and ChIP-seq
CRUP
CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.
Language:R000
ehmm
enhancer hidden Markov model for enhancer predictions based on chromatin marks.
Language:HTML000
epicseg
Chromatin segmentation in R
Language:HTML000
EPIGENE
EPIGENE models the observed combination of histone modifications using a product of independent Bernoulli random variables, to identify active transcription units.
Language:RMIT000
kfoots
R package to fit multivariate discrete probability distributions to count data
Language:C++000
seqtk
Toolkit for processing sequences in FASTA/Q formats
Language:CMIT000