Anna Cuomo's repositories
PhD_Thesis
LateX scripts to compile my PhD thesis
Anna_PhD_notebooks
Repository containing notebooks from various projects from my PhD
Anna_PostDoc_notebooks
Repository containing cheatsheets and resources across different projects from my postdoc
CellRegMap_analyses
Repository containing the code to reproduce the analyses described in the CellRegMap manuscript
fastglmm-paper
Fast GLMM paper writing and analysis.
annacuomo.github.io
Personal page for Anna Cuomo, PhD
CellRegMap
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
CellRegMap_speedup_testing
CellRegMap documentation and speed up testing
CellRegMap_Supplementary_Methods
LateX scripts to compile CellRegMap's supplementary methods
LRTq
Identifying effects of rare variants with likelihood ratio test
TenK10K_analyses
scripts and notebooks for analyses of the TenK10K datasets on Garvan's HPC system