GowthamJ's repositories
ACCESS-Pipeline
cfDNA Sequencing Pipeline with UMI
biopython
Official git repository for Biopython (converted from CVS)
computer-science-flash-cards
Mini website for testing both general CS knowledge and enforce coding practice and common algorithm/data structure memorization.
covidclinicaldata
Coronavirus Disease 2019 (COVID-19) Clinical Data Repository
Detectron
FAIR's research platform for object detection research, implementing popular algorithms like Mask R-CNN and RetinaNet.
edlib
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
ensembl-vep
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
facets-suite
Utility functions for FACETS
facets2n
Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing. Package created to test FACETS with both matched and unmatched normal.
genotype_variants
Project to genotype SNV, INDEL and SV.
gym
A toolkit for developing and comparing reinforcement learning algorithms.
iAnnotateSV
iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Generation DNA sequencing data.
linkedin-skill-assessments-quizzes
Full reference of LinkedIn answers 2021 for skill assessments, LinkedIn test, questions and answers (aws-lambda, rest-api, javascript, react, git, html, jquery, mongodb, java, css, python, machine-learning, power-point) linkedin excel test lösungen, linkedin machine learning test
lz
Go engine with no human-provided knowledge, modeled after the AlphaGo Zero paper.
MadeWithML
Learn how to responsibly deliver value with ML.
MLOps
A project-based course on the foundations of MLOps with a focus on intuition and application.
MONAI
AI Toolkit for Healthcare Imaging
networkx
Official NetworkX source code repository.
oh-my-zsh
A delightful community-driven (with 1,000+ contributors) framework for managing your zsh configuration. Includes 200+ optional plugins (rails, git, OSX, hub, capistrano, brew, ant, php, python, etc), over 140 themes to spice up your morning, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.
python-patterns
A collection of design patterns/idioms in Python
python-versioneer
version-string management for VCS-controlled trees
readtagger
tags reads in target bam based on other bam files
shared_scripts
Random scripts shared within the team
somatic-germline
data/scripts associated with somatic-germline manuscript
transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.
vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
xTea
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics