andrewwbutler

resume

Generate LaTeX and Markdown resume from YAML with Python.

hyde-lab-notebook

Lab notebook template based on hyde

academic-kickstart

Easily create a beautiful website using Academic and Hugo

alignparse

Align sequences and then parse features.

andrewwbutler.com

Personal Website

BiocGenerics

S4 generic functions used in Bioconductor

easy-data

easy access to benchmark datasets

ggplot2

An implementation of the Grammar of Graphics in R

hammond

Self hosted vehicle and expense management system. Like Clarkson, but better

haplohelper

hca-jamboree-how-many-cells

hdf5r

kableExtra

Construct Complex Table with knitr::kable() + pipe

monocle-release

NYMP_2018

phd-thesis-template

A LaTeX / XeLaTeX / LuaLaTeX PhD thesis template for Cambridge University Engineering Department (CUED)

r4ds

R for data science

reedmuenchcalculator

A python script for computing TCID50 using the Reed-Muench formula

sctransform

R package for modeling single cell UMI expression data using regularized negative binomial regression

seurat

R toolkit for single cell genomics

seurat-disk

Interfaces for HDF5-based Single Cell File Formats

titercalculator

Compute titers from endpoint dilution assays

velocyto.R

RNA velocity estimation in R