Andre Schumacher's repositories
stable-diffusion-webui
Stable Diffusion web UI
CausalImpact
An R package for causal inference in time series
Hadoop-BAM
Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework with the Picard SAM JDK, and command line tools similar to SAMtools.
avro-parquet-spark-example
An example of using Avro and Parquet in Spark SQL
incubator-parquet-mr
Mirror of Apache Parquet
scalding
A Scala API for Cascading
maxmind-geoip2-scala
Simple Scala wrapper for MaxMind GeoIP2 webservice client and database reader http://maxmind.github.io/GeoIP2-java/
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
spark
Mirror of Apache Spark
parquet-mr
Java readers/writers for Parquet columnar file formats to use with Map-Reduce
SeqPig
SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data.
docker-scripts
Dockerfiles and scripts for Spark and Shark Docker images
shark
Hive on Spark
dockerfiles
Repo to hold my Docker files
whirr
Mirror of Apache Whirr
adam
Avro Datafile for Alignment/Map