HadoopGenomics

HadoopGenomics

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HadoopGenomics's repositories

Hadoop-BAM

Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework

Language:JavaLicense:MITStargazers:70Issues:18Issues:95

SeqPig

SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data.

Language:JavaStargazers:9Issues:8Issues:0

htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

Language:JavaStargazers:1Issues:8Issues:0