amineuron's repositories

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MIAProject

Medical Image Analysis Lab (MIALab), University of Bern

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micro-sam

Segment Anything for Microscopy

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multired

Algorithm for structural reduction of multi-layer networks

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teamtomo.github.io

A collaborative knowledge sharing platform for the cryo-ET community

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TomoBEAR

TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.

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topaz

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

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