ambarishK / Neo-antigen-prediction

Computational Prediction of Neoantigens.

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Neo-antigen-prediction

Computational Prediction of Neoantigens.

Multi-media file

Personalis Video over neoantigen prediction

Linked repositories

[1] https://github.com/MathOnco/NeoPredPipe

References

[1] Schenck, R., Lakatos, E., Gatenbee, C. et al. NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline. BMC Bioinformatics 20, 264 (2019). https://doi.org/10.1186/s12859-019-2876-4

[1] Roudko V, Greenbaum B, Bhardwaj N. Computational Prediction and Validation of Tumor-Associated Neoantigens. Front Immunol. 2020;11:27. Published 2020 Jan 24. doi:10.3389/fimmu.2020.00027

[2] Enis Afgan, Dannon Baker, Bérénice Batut, Marius van den Beek, Dave Bouvier, Martin Čech, John Chilton, Dave Clements, Nate Coraor, Björn Grüning, Aysam Guerler, Jennifer Hillman-Jackson, Vahid Jalili, Helena Rasche, Nicola Soranzo, Jeremy Goecks, James Taylor, Anton Nekrutenko, and Daniel Blankenberg. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update, Nucleic Acids Research, Volume 46, Issue W1, 2 July 2018, Pages W537–W544, doi:10.1093/nar/gky379

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Computational Prediction of Neoantigens.