alexrockhill

MEEGbuddy

A tool for MEEG preprocessing and analysis using MNE

EMU_analysis

autoreject

Automated rejection and repair of bad trials/sensors in M/EEG

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-validator

Validator for the Brain Imaging Data Structure

mne-bids

MNE BIDS

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

pd-parser

A tool to parse photodiode events from a possibly corrupted channel, compatible with BIDS formatting

bpc_jupyter

Jupyter notebook for the basis profile curves

dipole-simulator2

Simulate a dipole in the brain and its presentation outside the head in EEG and MEG

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

ds004000

OpenNeuro dataset available at https://openneuro.org/datasets/ds004000

ds004085

OpenNeuro dataset available at https://openneuro.org/datasets/ds004085

hmmlearn

Hidden Markov Models in Python, with scikit-learn like API

mne-bids-pipeline

Automatically process entire electrophysiological datasets using MNE-Python.

mne-connectivity

Connectivity algorithms that leverage the mne-python API.

mne-gui-addons

MNE-Python GUI addons

mne-hcp

MNE-HCP for processing the Human Connectome Project MEG data using MNE-Python

mne-misc-data

Miscellaneous data

mne-nirs

Process Near-Infrared Spectroscopy Data in MNE

mne-qt-browser

A new backend for the 2D data browser in MNE-Python

mne-realtime

Realtime data analysis with MNE-Python

nipy

Neuroimaging in Python FMRI analysis package

pyvista

3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)

research-projects

Analysis scripts to reproduce research results

scipy

SciPy library main repository

sphinx-design

A sphinx extension for designing beautiful, screen-size responsive web components.

sphinx-gallery

Sphinx extension for automatic generation of an example gallery

sphinxcontrib-bibtex

Sphinx extension for bibtex style references.

website

This contains the content hosted on the FieldTrip website