alexatyszka

transrate2

PhyloFisher

PhyloFisher is a software package written in Python3 that can be used for the creation, analysis, and visualization of phylogenomic datasets that consist of eukaryotic protein sequences.

CAnDI

scripts to investigate gene tree conflict with gene families

Semblans

A C++ package that enables the bulk retrieval, processing, and assembly of transcriptome datasets

HybPiper

Recovering genes from targeted sequence capture data

macos-terminal-themes

Color schemes for default macOS Terminal.app

treePL

Phylogenetic penalized likelihood

PyPHLAWD

Python version of PHLAWD

BAli-Phy

Bayesian co-estimation of phylogenies and multiple alignments via MCMC

kakapo

A tool to extract and annotate genes from raw RNA-seq reads.

clust

Automatic and optimised consensus clustering of one or more heterogeneous datasets

ncbi-taxonomy-local

Locally-cached NCBI Taxonomy Database for Python

supernote-sync-tool

Simple terminal app to sync supernote notes to a local directory and convert them to a pdf

supernote-tool

Unofficial python tool for Supernote

Krona

Interactively explore metagenomes and more from a web browser.