Aleksander W. Nitka PhD's repositories
mritools
Some misc tools that I use when working with MRI data
dcmanon
Dicom mass anonymisation
dwiprep
A pre-processing pipeline for DWI data.
aleksandernitka
Config files for my GitHub profile.
mri_containers
Definitions (def) for Singularity builds.
aleksandernitka.github.io
Personal webiste based on the Jekyll theme for academics
surfdist
For calculating exact geodesic distances on cortical surface meshes
mriqapages
Set of scripts which run basic (and more advanced) qa checks and renders results into a html page.
fsl-topup
Flywheel Gear to execute TopUp from FSL
clabremoteassistant
Small GUI application capable of sending messages to the slack channel.
pyutils
Python Utilities
Thesis-SOP-Simulations
Simulations for the purpose of my PhD thesis.
awnrtools
Some tools i've made for myself for faster data analysis in R
SOPMOD
Basic script for RR, SOR etc modeling of SOP
EyeTracking_Tobii_PsychoPy_IOHUB
a short guide on how to use iohub when using Tobii Eye Trackers with PsychoPy Builder.
SOP_Stochastic_Simulator
Simulator of a single presentation of stimuli and its representation activation as described in Wagner's SOP theory.
SOPRMSIM
SOP Recognition Memory Simulator
BDI
Calculates BDI score from Google Forms output
phd_experiment_02
Data analysis for exp2
phd_experiment_01
Analysis code for Experiment 01
StatisticTools
Some helpful functions for the PhD data analysis
FizzBuzz
just a fizzbuzz problem solutions in R
LAT_EEG
init
Machine_Learning_Coursera
Notes and code for the Andrew Ng's Coursera course on Machine Learning