aleimba

zotero-better-bibtex

Make Zotero effective for us LaTeX holdouts

Schloss_PrePrints_mBio_2017

sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

cutadapt

Cutadapt removes adapter sequences from sequencing reads

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

Wuerzburg

Monthly HackyHour meetings in Würzburg

Goettingen

Monthly HackyHour meetings in Göttingen http://hackyhour.github.io/Goettingen/

HackyHour.github.io

Organization Website

2016-pycon-tutorial

Materials for "Creating, building, testing, and documenting a Python project - a hands-on HOWTO - PyCon 2016"

sciencefair

The futuristic, fabulous and free desktop app for working with scientific literature :microscope: :book:

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

Open_Science_101

Open_Science_101

openscienceprize

:telescope: Everpub - Making reusability a first class citizen in the scientific workflow.

blobtools

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

github-markdown-toc

Easy TOC creation for GitHub README.md

nucleotides-data

Structured input data for nucleotid.es bioinformatics software benchmarking

biopython

Official git repository for Biopython (originally converted from CVS)

PO_2_GENECONTENT

Generate GeneContent trees based on based the presence or absence of Genes from a given bacterial pan-genome using bidirectional BLAST results obtained with proteinortho

PO_2_MLSA

Enables the calculation of phylogenies based on single copy core genome gene products, based on bidirectional BLAST results obtained with proteinortho

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Mission_Statement

Mission Statement der deutschsprachigen Open Science AG

miscperlscripts

Small collection of random useful perl scripts

Bio-FeatureIO

Sequence Feature streams

bioperl-run

BioPerl wrappers

READemption

A pipeline for the computational evaluation of RNA-Seq data

An-Introduction-To-Applied-Bioinformatics

Interactive lessons in bioinformatics.

prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

bioperl-live

Core BioPerl 1.x code

seqtk

Toolkit for processing sequences in FASTA/Q formats