Alessio Giacomel's repositories
Imaging-transcriptomics
A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
Imaging_Transcriptomics_preprint
Perform virtual histology analysis of a medical imaging file.
bids-specification
Brain Imaging Data Structure (BIDS) Specification
CPC_ML_tutorial
Code & Data for Computational Psychiatry Course Tutorial on Machine Learning
kcl-thesis-template-markdown
King's College London - Thesis Template in Markdown
MetBrewer
Color palette package in R inspired by works at the Metropolitan Museum of Art in New York
neuroHarmonize
Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).
PCNtoolkit
Toolbox for normative modelling and spatial inference of neuroimaging data. https://pcntoolkit.readthedocs.io/en/latest/
Quicksheets
various cheatsheets for different coding languages
the-turing-way
Host repository for The Turing Way: a how to guide for reproducible data science
Web-Scraping-PubMed
This Python Program takes a keyword and outputs n abstracts + bibliographies from PubMed