Alexandre René's repositories
colored-noise
An implementation of the sparse convolution algorithm (Lewis, 1989) for generating solid time-series of colored noise.
publish-to-pypi
Short guidelines to get a Python project to PyPI as painlessly as possible
pyloric-network-simulator
Pure-Python, JAX-accelerate implementation of the pyloric circuit model described by Prinz et al (Nat. Neurosci., 2004)
emd-falsify
Original implementation of the EMD (empirical model discrepancy) model comparison criterion
mcbackend
A backend for storing MCMC draws.
valconfig
Simple, extendable configuration files, using Pydantic for validation.
portfolio
Alexandre René’s personal webpage
parameters
Management of large, hierarchical parameter sets for modelling and simulation
gatsby-theme-intro
Personal branding theme for developers
gatsby-theme-intro-academic
An academic variant of the Intro. personal branding theme for Gatsby
frantic
Modular C++ integrators for stochastic delayed differential equations
lapreprint
A template for easily creating pretty, nicely formatted preprints in LaTeX
mystjs
Parser and CLI for MyST Markdown, built in Javascript
sphinx-book-theme
A clean book theme for scientific explanations and documentation with Sphinx
fokker-planck-brief-intro
A brief, opinionated introduction to the Fokker-Planck equation
metalogistic
A Python package for the metalogistic (or metalog) distribution, a flexible probability distribution that can be used to model data without traditional parameters.
sphinx
Main repository for the Sphinx documentation builder
MarkdownPreview
Markdown preview and build plugin for Sublime Text https://facelessuser.github.io/MarkdownPreview/
MyST-NB-Bokeh
Pasting Bokeh figures in MyST-NB
reveal.js
Personal reveal.js fork
pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
FrEIA
Framework for Easily Invertible Architectures
expand-latex-macros
A helper for flattening and removing macros from .tex files.
python-container
Template for building self-container python package containers