Xin Wu's repositories

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amazon-emr-with-delta-lake

Amazon EMR Notebook to show how to read from and write to Delta tables with Amazon EMR

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automation-api-examples

Examples for the Pulumi Automation API https://pkg.go.dev/github.com/pulumi/pulumi/sdk/v3/go/auto?tab=doc

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Awesome-Federated-Machine-Learning

Everything about federated learning, including research papers, books, codes, tutorials, videos and beyond

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aws-genomics-workflows

Genomics Workflows on AWS

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Bison-Fly

Bison-Fly is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome UAV community (D2P). In this pipeline we are presenting step by step how we have been applying UAV data on our breeding program. This is a open source R code from where anyone can use and adept for different crops. All suggestions are welcome. Help us to bui

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cdk-emrserverless-with-delta-lake

This construct builds some elements for you to quickly launch an EMR Serverless application. After submitting the Emr Serverless job, you could also launch an EMR notebook via cluster template to check the outcome from the EMR Serverless application.

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city_pipeline

a Data warehouse tech stack with postgres , DBT, Airflow

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cpg-cost-control

A Cloud Function to handle GCP billing budget notifications.

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cpg-infrastructure

This repository is used to manage the infrastructure at the CPG

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DeepGP

A tool to implement Genomic Prediction Experiments using Deep Learning

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devops-for-databricks

devops-for-databricks

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emr-serverless-samples

Example code for running Spark and Hive jobs on EMR Serverless.

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fatty_acid_nirs_model

Using near-infrared spectroscopy (NIRS) and machine learning to determine oleic acid content from peanut raw grains

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galaxy

Data intensive science for everyone.

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genomics-pipelines

secondary analysis pipelines parallelized with apache spark

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GenomicsDB

Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.

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glow

An open-source toolkit for large-scale genomic analysis

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HaploNet

Haplotype and population structure inference using neural networks.

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multitrait-nirs-model

Modeling of nutritional traits from multiple crops using NIRS and machine learning/statistics

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NanoVar

Structural variant caller for low-depth long-read sequencing data

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NeuralPLexer

NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

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nirs-protein-prediction

We present here a 1D convolutional neural network model to predict grain protein content using spectroscopic data of multiple cereals

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Soybean_Trait_Prediction

Jupyter Notebooks for Code Used In Machine learning prediction models outperform deep learning models, provide interpretation and facilitate successful feature selection for soybean trait prediction

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torchdrug

A powerful and flexible machine learning platform for drug discovery

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